Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15□□□□□ -0.01
SNCAP37840 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SNCAP37840 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15□□□□□ -0.01
SNCAP37840 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15□□□□□ -0.01
SNCAP37840 AP003097.1-201ENST00000530657 1135 ntBASIC15□□□□□ -0.01
SNCAP37840 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15□□□□□ -0.01
SNCAP37840 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15□□□□□ -0.01
SNCAP37840 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15□□□□□ -0.01
SNCAP37840 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SNCAP37840 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SNCAP37840 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SNCAP37840 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 AC138028.4-201ENST00000564984 1845 ntBASIC14.99□□□□□ -0.01
SNCAP37840 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SNCAP37840 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.99□□□□□ -0.01
SNCAP37840 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SNCAP37840 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 AL355802.2-201ENST00000402069 882 ntBASIC14.99□□□□□ -0.01
SNCAP37840 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.99□□□□□ -0.01
SNCAP37840 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.99□□□□□ -0.01
SNCAP37840 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.99□□□□□ -0.01
SNCAP37840 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.99□□□□□ -0.01
SNCAP37840 AC092666.2-201ENST00000613287 246 ntBASIC14.99□□□□□ -0.01
SNCAP37840 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.99□□□□□ -0.01
SNCAP37840 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
SNCAP37840 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.99□□□□□ -0.01
SNCAP37840 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNCAP37840 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SNCAP37840 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.98□□□□□ -0.01
SNCAP37840 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.98□□□□□ -0.01
SNCAP37840 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 AC022211.2-201ENST00000585075 2527 ntBASIC14.98□□□□□ -0.01
SNCAP37840 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SNCAP37840 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SNCAP37840 AC239809.2-201ENST00000415381 517 ntBASIC14.98□□□□□ -0.01
SNCAP37840 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.98□□□□□ -0.01
SNCAP37840 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.98□□□□□ -0.01
SNCAP37840 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.98□□□□□ -0.01
SNCAP37840 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.98□□□□□ -0.01
SNCAP37840 RNA5SP413-201ENST00000516373 109 ntBASIC14.98□□□□□ -0.01
SNCAP37840 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.98□□□□□ -0.01
SNCAP37840 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.98□□□□□ -0.01
SNCAP37840 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.98□□□□□ -0.01
SNCAP37840 MTDHP1-201ENST00000605323 784 ntBASIC14.98□□□□□ -0.01
SNCAP37840 MYC-208ENST00000641036 567 ntBASIC14.98□□□□□ -0.01
SNCAP37840 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SNCAP37840 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
SNCAP37840 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SNCAP37840 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms