Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCLP35914 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.1■□□□□ 0.49
HMGCLP35914 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCLP35914 RNF126P1-202ENST00000569893 925 ntBASIC18.1■□□□□ 0.49
HMGCLP35914 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
HMGCLP35914 AC005332.3-201ENST00000589904 676 ntBASIC18.1■□□□□ 0.49
HMGCLP35914 AC004263.2-201ENST00000617183 678 ntBASIC18.1■□□□□ 0.49
HMGCLP35914 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCLP35914 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGCLP35914 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.1■□□□□ 0.49
HMGCLP35914 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 AC138028.4-201ENST00000564984 1845 ntBASIC18.09■□□□□ 0.49
HMGCLP35914 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HMGCLP35914 FLJ13224-201ENST00000313737 1514 ntBASIC18.09■□□□□ 0.49
HMGCLP35914 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 AL353692.3-201ENST00000407031 1396 ntBASIC18.09■□□□□ 0.49
HMGCLP35914 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGCLP35914 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGCLP35914 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGCLP35914 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGCLP35914 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HMGCLP35914 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGCLP35914 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGCLP35914 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGCLP35914 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGCLP35914 AL390719.2-201ENST00000606993 987 ntBASIC18.09■□□□□ 0.49
HMGCLP35914 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCLP35914 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HMGCLP35914 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCLP35914 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HMGCLP35914 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
HMGCLP35914 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGCLP35914 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGCLP35914 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
HMGCLP35914 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCLP35914 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HMGCLP35914 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCLP35914 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCLP35914 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGCLP35914 AC116407.4-201ENST00000623319 1061 ntBASIC18.08■□□□□ 0.48
HMGCLP35914 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HMGCLP35914 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCLP35914 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGCLP35914 Z83836.1-201ENST00000624605 1642 ntBASIC18.08■□□□□ 0.48
HMGCLP35914 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HMGCLP35914 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCLP35914 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms