Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
COPB2P35606 AL049812.1-201ENST00000432563 2267 ntBASIC20.75■□□□□ 0.91
COPB2P35606 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COPB2P35606 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COPB2P35606 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COPB2P35606 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.74■□□□□ 0.91
COPB2P35606 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.74■□□□□ 0.91
COPB2P35606 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COPB2P35606 SCARNA2-201ENST00000458748 420 ntBASIC20.74■□□□□ 0.91
COPB2P35606 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.74■□□□□ 0.91
COPB2P35606 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.74■□□□□ 0.91
COPB2P35606 AC011467.2-201ENST00000598425 242 ntBASIC20.74■□□□□ 0.91
COPB2P35606 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPB2P35606 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COPB2P35606 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COPB2P35606 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.73■□□□□ 0.91
COPB2P35606 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
COPB2P35606 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.73■□□□□ 0.91
COPB2P35606 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.73■□□□□ 0.91
COPB2P35606 AC073648.2-201ENST00000510116 352 ntBASIC20.73■□□□□ 0.91
COPB2P35606 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.73■□□□□ 0.91
COPB2P35606 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.73■□□□□ 0.91
COPB2P35606 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.73■□□□□ 0.91
COPB2P35606 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.73■□□□□ 0.91
COPB2P35606 AC117500.6-201ENST00000624871 588 ntBASIC20.73■□□□□ 0.91
COPB2P35606 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COPB2P35606 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.73■□□□□ 0.91
COPB2P35606 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COPB2P35606 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPB2P35606 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.72■□□□□ 0.91
COPB2P35606 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
COPB2P35606 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 AC125634.1-201ENST00000438758 1403 ntBASIC20.72■□□□□ 0.91
COPB2P35606 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.72■□□□□ 0.91
COPB2P35606 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COPB2P35606 PMS2P1-201ENST00000431037 1228 ntBASIC20.72■□□□□ 0.91
COPB2P35606 AC018712.1-201ENST00000455767 687 ntBASIC20.72■□□□□ 0.91
COPB2P35606 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.72■□□□□ 0.91
COPB2P35606 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.72■□□□□ 0.91
COPB2P35606 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.72■□□□□ 0.91
COPB2P35606 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.72■□□□□ 0.91
COPB2P35606 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 INTS4P1-201ENST00000438455 1935 ntBASIC20.72■□□□□ 0.91
COPB2P35606 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 BX323043.1-201ENST00000641006 1765 ntBASIC20.72■□□□□ 0.91
COPB2P35606 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPB2P35606 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.71■□□□□ 0.91
COPB2P35606 TNXA-203ENST00000507684 2038 ntBASIC20.71■□□□□ 0.91
COPB2P35606 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.71■□□□□ 0.91
COPB2P35606 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COPB2P35606 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COPB2P35606 FGFR3P6-201ENST00000457012 610 ntBASIC20.71■□□□□ 0.91
COPB2P35606 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.71■□□□□ 0.91
COPB2P35606 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.71■□□□□ 0.91
COPB2P35606 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.71■□□□□ 0.91
COPB2P35606 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms