Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MMP11P24347 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP11P24347 AC126763.1-201ENST00000552015 2118 ntBASIC17.27■□□□□ 0.36
MMP11P24347 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MMP11P24347 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.27■□□□□ 0.36
MMP11P24347 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP11P24347 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MMP11P24347 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MMP11P24347 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MMP11P24347 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP11P24347 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP11P24347 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP11P24347 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MMP11P24347 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 AL450487.1-201ENST00000426799 995 ntBASIC17.27■□□□□ 0.36
MMP11P24347 CHCHD2P8-201ENST00000429873 447 ntBASIC17.27■□□□□ 0.36
MMP11P24347 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.27■□□□□ 0.36
MMP11P24347 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.27■□□□□ 0.36
MMP11P24347 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MMP11P24347 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP11P24347 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MMP11P24347 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP11P24347 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP11P24347 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP11P24347 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
MMP11P24347 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP11P24347 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP11P24347 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.27■□□□□ 0.35
MMP11P24347 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP11P24347 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.27■□□□□ 0.35
MMP11P24347 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP11P24347 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MMP11P24347 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP11P24347 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MMP11P24347 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MMP11P24347 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.26■□□□□ 0.35
MMP11P24347 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.26■□□□□ 0.35
MMP11P24347 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP11P24347 RNF126P1-202ENST00000569893 925 ntBASIC17.26■□□□□ 0.35
MMP11P24347 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MMP11P24347 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MMP11P24347 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MMP11P24347 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
MMP11P24347 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP11P24347 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MMP11P24347 MTMR9LP-203ENST00000426597 1545 ntBASIC17.26■□□□□ 0.35
MMP11P24347 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP11P24347 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP11P24347 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.26■□□□□ 0.35
MMP11P24347 AC073592.3-201ENST00000625118 1834 ntBASIC17.26■□□□□ 0.35
MMP11P24347 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP11P24347 NOC2LP2-201ENST00000407594 1944 ntBASIC17.25■□□□□ 0.35
MMP11P24347 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.25■□□□□ 0.35
MMP11P24347 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP11P24347 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP11P24347 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 AP000593.1-201ENST00000393668 712 ntBASIC17.25■□□□□ 0.35
MMP11P24347 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP11P24347 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MMP11P24347 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP11P24347 AP002383.4-201ENST00000442518 975 ntBASIC17.25■□□□□ 0.35
MMP11P24347 AP003733.1-201ENST00000491725 852 ntBASIC17.25■□□□□ 0.35
MMP11P24347 KRT18P41-201ENST00000518924 1277 ntBASIC17.25■□□□□ 0.35
MMP11P24347 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP11P24347 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP11P24347 MIR3652-201ENST00000579335 131 ntBASIC17.25■□□□□ 0.35
MMP11P24347 MIR3180-1-201ENST00000580374 94 ntBASIC17.25■□□□□ 0.35
MMP11P24347 MIR3180-3-201ENST00000584616 94 ntBASIC17.25■□□□□ 0.35
MMP11P24347 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
MMP11P24347 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.25■□□□□ 0.35
MMP11P24347 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms