Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 HCG4P8-203ENST00000443049 980 ntBASIC18.34■□□□□ 0.53
XPAP23025 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.34■□□□□ 0.53
XPAP23025 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.34■□□□□ 0.53
XPAP23025 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
XPAP23025 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.34■□□□□ 0.53
XPAP23025 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
XPAP23025 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
XPAP23025 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.34■□□□□ 0.53
XPAP23025 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.34■□□□□ 0.53
XPAP23025 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XPAP23025 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
XPAP23025 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
XPAP23025 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
XPAP23025 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XPAP23025 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XPAP23025 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XPAP23025 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.34■□□□□ 0.53
XPAP23025 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XPAP23025 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
XPAP23025 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XPAP23025 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
XPAP23025 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XPAP23025 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XPAP23025 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
XPAP23025 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
XPAP23025 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
XPAP23025 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.33■□□□□ 0.53
XPAP23025 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.33■□□□□ 0.53
XPAP23025 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
XPAP23025 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.33■□□□□ 0.52
XPAP23025 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
XPAP23025 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
XPAP23025 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.33■□□□□ 0.52
XPAP23025 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.33■□□□□ 0.52
XPAP23025 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
XPAP23025 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.33■□□□□ 0.52
XPAP23025 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.33■□□□□ 0.52
XPAP23025 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
XPAP23025 TNXA-203ENST00000507684 2038 ntBASIC18.33■□□□□ 0.52
XPAP23025 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
XPAP23025 GMCL1P1-201ENST00000463439 1581 ntBASIC18.33■□□□□ 0.52
XPAP23025 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.33■□□□□ 0.52
XPAP23025 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
XPAP23025 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
XPAP23025 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.33■□□□□ 0.52
XPAP23025 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XPAP23025 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.33■□□□□ 0.52
XPAP23025 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.32■□□□□ 0.52
XPAP23025 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
XPAP23025 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
XPAP23025 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
XPAP23025 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
XPAP23025 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
XPAP23025 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 CHCHD2P8-201ENST00000429873 447 ntBASIC18.32■□□□□ 0.52
XPAP23025 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.32■□□□□ 0.52
XPAP23025 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.32■□□□□ 0.52
XPAP23025 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.32■□□□□ 0.52
XPAP23025 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.32■□□□□ 0.52
XPAP23025 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.32■□□□□ 0.52
XPAP23025 AL390719.2-201ENST00000606993 987 ntBASIC18.32■□□□□ 0.52
XPAP23025 IGHV3-41-201ENST00000613121 348 ntBASIC18.32■□□□□ 0.52
XPAP23025 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.32■□□□□ 0.52
XPAP23025 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.32■□□□□ 0.52
XPAP23025 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 RNF165-205ENST00000588679 2904 ntBASIC18.32■□□□□ 0.52
XPAP23025 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
XPAP23025 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
XPAP23025 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XPAP23025 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.31■□□□□ 0.52
XPAP23025 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
XPAP23025 AL353692.3-201ENST00000407031 1396 ntBASIC18.31■□□□□ 0.52
XPAP23025 AC016734.2-201ENST00000624325 1377 ntBASIC18.31■□□□□ 0.52
XPAP23025 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
XPAP23025 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
XPAP23025 KRT18P1-202ENST00000452408 1331 ntBASIC18.31■□□□□ 0.52
XPAP23025 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.31■□□□□ 0.52
XPAP23025 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XPAP23025 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XPAP23025 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms