Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC008764.6-201ENST00000595909 2069 ntBASIC18.52■□□□□ 0.56
NFKB1P19838 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 FLJ13224-201ENST00000313737 1514 ntBASIC18.52■□□□□ 0.56
NFKB1P19838 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NFKB1P19838 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NFKB1P19838 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.52■□□□□ 0.55
NFKB1P19838 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NFKB1P19838 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.51■□□□□ 0.55
NFKB1P19838 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NFKB1P19838 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NFKB1P19838 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.51■□□□□ 0.55
NFKB1P19838 AP000997.3-201ENST00000623333 2250 ntBASIC18.51■□□□□ 0.55
NFKB1P19838 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.51■□□□□ 0.55
NFKB1P19838 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NFKB1P19838 SPDYE15P-201ENST00000424157 909 ntBASIC18.51■□□□□ 0.55
NFKB1P19838 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.51■□□□□ 0.55
NFKB1P19838 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.51■□□□□ 0.55
NFKB1P19838 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NFKB1P19838 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.51■□□□□ 0.55
NFKB1P19838 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.51■□□□□ 0.55
NFKB1P19838 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NFKB1P19838 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.51■□□□□ 0.55
NFKB1P19838 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.51■□□□□ 0.55
NFKB1P19838 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NFKB1P19838 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NFKB1P19838 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.5■□□□□ 0.55
NFKB1P19838 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NFKB1P19838 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.5■□□□□ 0.55
NFKB1P19838 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.5■□□□□ 0.55
NFKB1P19838 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NFKB1P19838 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.5■□□□□ 0.55
NFKB1P19838 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NFKB1P19838 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NFKB1P19838 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.5■□□□□ 0.55
NFKB1P19838 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NFKB1P19838 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKB1P19838 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NFKB1P19838 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.49■□□□□ 0.55
NFKB1P19838 AC006011.2-201ENST00000621313 1158 ntBASIC18.49■□□□□ 0.55
NFKB1P19838 AC079602.3-201ENST00000623931 403 ntBASIC18.49■□□□□ 0.55
NFKB1P19838 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms