Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.05■□□□□ 0.8
GAP43P17677 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.05■□□□□ 0.8
GAP43P17677 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.05■□□□□ 0.8
GAP43P17677 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.05■□□□□ 0.8
GAP43P17677 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GAP43P17677 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GAP43P17677 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GAP43P17677 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.05■□□□□ 0.8
GAP43P17677 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GAP43P17677 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GAP43P17677 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GAP43P17677 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 AC132938.6-201ENST00000623828 1655 ntBASIC20.04■□□□□ 0.8
GAP43P17677 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
GAP43P17677 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.04■□□□□ 0.8
GAP43P17677 AP003733.1-201ENST00000491725 852 ntBASIC20.04■□□□□ 0.8
GAP43P17677 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
GAP43P17677 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.04■□□□□ 0.8
GAP43P17677 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.04■□□□□ 0.8
GAP43P17677 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GAP43P17677 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.04■□□□□ 0.8
GAP43P17677 HCG11-201ENST00000411553 5696 ntBASIC20.04■□□□□ 0.8
GAP43P17677 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GAP43P17677 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.03■□□□□ 0.8
GAP43P17677 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.03■□□□□ 0.8
GAP43P17677 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GAP43P17677 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
GAP43P17677 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.03■□□□□ 0.8
GAP43P17677 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GAP43P17677 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 IGHGP-201ENST00000390555 1178 ntBASIC20.03■□□□□ 0.8
GAP43P17677 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 SPDYE13P-201ENST00000445314 798 ntBASIC20.03■□□□□ 0.8
GAP43P17677 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.03■□□□□ 0.8
GAP43P17677 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.03■□□□□ 0.8
GAP43P17677 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
GAP43P17677 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.03■□□□□ 0.8
GAP43P17677 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GAP43P17677 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.03■□□□□ 0.8
GAP43P17677 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
GAP43P17677 LINC00602-201ENST00000629776 2065 ntBASIC20.03■□□□□ 0.8
GAP43P17677 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
GAP43P17677 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.02■□□□□ 0.8
GAP43P17677 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.02■□□□□ 0.8
GAP43P17677 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.02■□□□□ 0.8
GAP43P17677 SLC25A6P5-201ENST00000435663 894 ntBASIC20.02■□□□□ 0.8
GAP43P17677 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.02■□□□□ 0.8
GAP43P17677 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.02■□□□□ 0.8
GAP43P17677 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.02■□□□□ 0.8
GAP43P17677 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.02■□□□□ 0.8
GAP43P17677 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.02■□□□□ 0.8
GAP43P17677 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GAP43P17677 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.02■□□□□ 0.8
GAP43P17677 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
GAP43P17677 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.02■□□□□ 0.79
GAP43P17677 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GAP43P17677 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.02■□□□□ 0.79
GAP43P17677 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.02■□□□□ 0.79
GAP43P17677 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.02■□□□□ 0.79
GAP43P17677 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms