Protein–RNA interactions for Protein: P17661

DES, Desmin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DESP17661 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.22■□□□□ 0.67
DESP17661 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.22■□□□□ 0.67
DESP17661 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
DESP17661 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.22■□□□□ 0.67
DESP17661 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.22■□□□□ 0.67
DESP17661 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
DESP17661 AC024243.1-201ENST00000609234 778 ntBASIC19.22■□□□□ 0.67
DESP17661 AC005363.2-201ENST00000618631 242 ntBASIC19.22■□□□□ 0.67
DESP17661 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DESP17661 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.22■□□□□ 0.67
DESP17661 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.22■□□□□ 0.67
DESP17661 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.22■□□□□ 0.67
DESP17661 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
DESP17661 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.22■□□□□ 0.67
DESP17661 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 AL390961.4-201ENST00000623958 2535 ntBASIC19.21■□□□□ 0.67
DESP17661 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.21■□□□□ 0.67
DESP17661 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.21■□□□□ 0.67
DESP17661 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
DESP17661 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
DESP17661 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.21■□□□□ 0.67
DESP17661 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.21■□□□□ 0.67
DESP17661 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 AC140113.3-201ENST00000605663 199 ntBASIC19.21■□□□□ 0.67
DESP17661 AC141257.4-201ENST00000634557 245 ntBASIC19.21■□□□□ 0.67
DESP17661 AC136944.6-201ENST00000634818 245 ntBASIC19.21■□□□□ 0.67
DESP17661 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.21■□□□□ 0.67
DESP17661 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.21■□□□□ 0.67
DESP17661 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DESP17661 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.21■□□□□ 0.67
DESP17661 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
DESP17661 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
DESP17661 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DESP17661 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DESP17661 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DESP17661 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.2■□□□□ 0.66
DESP17661 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.2■□□□□ 0.66
DESP17661 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.2■□□□□ 0.66
DESP17661 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.2■□□□□ 0.66
DESP17661 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.2■□□□□ 0.66
DESP17661 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.2■□□□□ 0.66
DESP17661 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.2■□□□□ 0.66
DESP17661 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.2■□□□□ 0.66
DESP17661 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.2■□□□□ 0.66
DESP17661 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
DESP17661 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DESP17661 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.2■□□□□ 0.66
DESP17661 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.2■□□□□ 0.66
DESP17661 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.2■□□□□ 0.66
DESP17661 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DESP17661 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DESP17661 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DESP17661 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DESP17661 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.19■□□□□ 0.66
DESP17661 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DESP17661 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
DESP17661 NEFHP1-201ENST00000412845 2629 ntBASIC19.19■□□□□ 0.66
DESP17661 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
DESP17661 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
DESP17661 AL137013.1-201ENST00000432946 1228 ntBASIC19.19■□□□□ 0.66
DESP17661 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.19■□□□□ 0.66
DESP17661 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.19■□□□□ 0.66
DESP17661 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.19■□□□□ 0.66
DESP17661 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms