Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA1P17096 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA1P17096 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA1P17096 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGA1P17096 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA1P17096 AC093010.1-201ENST00000473625 1624 ntBASIC18.81■□□□□ 0.6
HMGA1P17096 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGA1P17096 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HMGA1P17096 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMGA1P17096 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HMGA1P17096 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMGA1P17096 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.8■□□□□ 0.6
HMGA1P17096 AC008608.2-201ENST00000606089 416 ntBASIC18.8■□□□□ 0.6
HMGA1P17096 AP001269.4-201ENST00000609611 512 ntBASIC18.8■□□□□ 0.6
HMGA1P17096 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.8■□□□□ 0.6
HMGA1P17096 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGA1P17096 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGA1P17096 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGA1P17096 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HMGA1P17096 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGA1P17096 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGA1P17096 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGA1P17096 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGA1P17096 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA1P17096 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HMGA1P17096 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.8■□□□□ 0.6
HMGA1P17096 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HMGA1P17096 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
HMGA1P17096 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HMGA1P17096 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGA1P17096 FAM197Y8-203ENST00000450145 560 ntBASIC18.79■□□□□ 0.6
HMGA1P17096 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGA1P17096 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGA1P17096 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 AL355877.3-201ENST00000622820 899 ntBASIC18.79■□□□□ 0.6
HMGA1P17096 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HMGA1P17096 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA1P17096 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMGA1P17096 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA1P17096 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA1P17096 BX323043.1-201ENST00000641006 1765 ntBASIC18.78■□□□□ 0.6
HMGA1P17096 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA1P17096 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA1P17096 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA1P17096 AC098818.2-201ENST00000564925 2320 ntBASIC18.78■□□□□ 0.6
HMGA1P17096 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA1P17096 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGA1P17096 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HMGA1P17096 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HMGA1P17096 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGA1P17096 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA1P17096 FGFR3P6-201ENST00000457012 610 ntBASIC18.78■□□□□ 0.6
HMGA1P17096 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGA1P17096 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGA1P17096 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGA1P17096 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGA1P17096 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGA1P17096 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGA1P17096 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HMGA1P17096 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGA1P17096 AC018445.3-201ENST00000624177 1945 ntBASIC18.78■□□□□ 0.6
HMGA1P17096 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms