Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GCFC2P16383 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GCFC2P16383 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GCFC2P16383 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.54■□□□□ 0.88
GCFC2P16383 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.54■□□□□ 0.88
GCFC2P16383 TSPY22P-201ENST00000427496 604 ntBASIC20.54■□□□□ 0.88
GCFC2P16383 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GCFC2P16383 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 KRT8P26-201ENST00000534154 1276 ntBASIC20.54■□□□□ 0.88
GCFC2P16383 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GCFC2P16383 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.54■□□□□ 0.88
GCFC2P16383 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GCFC2P16383 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GCFC2P16383 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 AC132938.6-201ENST00000623828 1655 ntBASIC20.54■□□□□ 0.88
GCFC2P16383 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GCFC2P16383 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
GCFC2P16383 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GCFC2P16383 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 KRT18P65-201ENST00000439811 1286 ntBASIC20.53■□□□□ 0.88
GCFC2P16383 DUTP2-201ENST00000519164 463 ntBASIC20.53■□□□□ 0.88
GCFC2P16383 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.53■□□□□ 0.88
GCFC2P16383 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.53■□□□□ 0.88
GCFC2P16383 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCFC2P16383 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
GCFC2P16383 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
GCFC2P16383 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCFC2P16383 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
GCFC2P16383 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.52■□□□□ 0.88
GCFC2P16383 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
GCFC2P16383 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCFC2P16383 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCFC2P16383 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCFC2P16383 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.52■□□□□ 0.88
GCFC2P16383 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GCFC2P16383 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.52■□□□□ 0.88
GCFC2P16383 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GCFC2P16383 AC009154.2-201ENST00000621177 724 ntBASIC20.52■□□□□ 0.88
GCFC2P16383 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCFC2P16383 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.52■□□□□ 0.88
GCFC2P16383 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.52■□□□□ 0.88
GCFC2P16383 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCFC2P16383 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCFC2P16383 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
GCFC2P16383 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.51■□□□□ 0.87
GCFC2P16383 TSPY12P-201ENST00000421279 868 ntBASIC20.51■□□□□ 0.87
GCFC2P16383 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.51■□□□□ 0.87
GCFC2P16383 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.51■□□□□ 0.87
GCFC2P16383 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.51■□□□□ 0.87
GCFC2P16383 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.51■□□□□ 0.87
GCFC2P16383 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GCFC2P16383 AL121672.3-201ENST00000608644 468 ntBASIC20.51■□□□□ 0.87
GCFC2P16383 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.51■□□□□ 0.87
GCFC2P16383 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.51■□□□□ 0.87
GCFC2P16383 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GCFC2P16383 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.51■□□□□ 0.87
GCFC2P16383 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.51■□□□□ 0.87
GCFC2P16383 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.51■□□□□ 0.87
GCFC2P16383 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GCFC2P16383 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.51■□□□□ 0.87
GCFC2P16383 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCFC2P16383 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCFC2P16383 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
GCFC2P16383 REXO1L9P-201ENST00000604264 2108 ntBASIC20.5■□□□□ 0.87
GCFC2P16383 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms