Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC31.68■■■□□ 2.66
TOP2AP11388 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
TOP2AP11388 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC31.67■■■□□ 2.66
TOP2AP11388 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TOP2AP11388 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
TOP2AP11388 COA5-202ENST00000409997 557 ntTSL 4 BASIC31.67■■■□□ 2.66
TOP2AP11388 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
TOP2AP11388 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TOP2AP11388 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC31.67■■■□□ 2.66
TOP2AP11388 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TOP2AP11388 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC31.67■■■□□ 2.66
TOP2AP11388 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TOP2AP11388 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC31.67■■■□□ 2.66
TOP2AP11388 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
TOP2AP11388 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC31.67■■■□□ 2.66
TOP2AP11388 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC31.67■■■□□ 2.66
TOP2AP11388 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TOP2AP11388 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TOP2AP11388 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TOP2AP11388 DNAJB3-202ENST00000449667 1266 ntBASIC31.66■■■□□ 2.66
TOP2AP11388 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TOP2AP11388 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC31.66■■■□□ 2.66
TOP2AP11388 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TOP2AP11388 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC31.66■■■□□ 2.66
TOP2AP11388 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
TOP2AP11388 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
TOP2AP11388 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC31.65■■■□□ 2.66
TOP2AP11388 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TOP2AP11388 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC31.65■■■□□ 2.66
TOP2AP11388 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC31.65■■■□□ 2.66
TOP2AP11388 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TOP2AP11388 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC31.65■■■□□ 2.66
TOP2AP11388 AC112482.1-201ENST00000492080 688 ntBASIC31.65■■■□□ 2.66
TOP2AP11388 AC136632.2-201ENST00000512891 861 ntBASIC31.65■■■□□ 2.66
TOP2AP11388 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TOP2AP11388 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC31.65■■■□□ 2.66
TOP2AP11388 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TOP2AP11388 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TOP2AP11388 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TOP2AP11388 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TOP2AP11388 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TOP2AP11388 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TOP2AP11388 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TOP2AP11388 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC31.65■■■□□ 2.66
TOP2AP11388 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC31.65■■■□□ 2.66
TOP2AP11388 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TOP2AP11388 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC31.64■■■□□ 2.66
TOP2AP11388 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC31.64■■■□□ 2.66
TOP2AP11388 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC31.64■■■□□ 2.66
TOP2AP11388 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC31.64■■■□□ 2.66
TOP2AP11388 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC31.64■■■□□ 2.66
TOP2AP11388 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC31.64■■■□□ 2.66
TOP2AP11388 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC31.64■■■□□ 2.66
TOP2AP11388 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC31.64■■■□□ 2.66
TOP2AP11388 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TOP2AP11388 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC31.63■■■□□ 2.65
TOP2AP11388 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TOP2AP11388 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TOP2AP11388 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TOP2AP11388 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
TOP2AP11388 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TOP2AP11388 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC31.63■■■□□ 2.65
TOP2AP11388 YBX1P5-201ENST00000509441 847 ntBASIC31.63■■■□□ 2.65
TOP2AP11388 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC31.63■■■□□ 2.65
TOP2AP11388 CIPC-205ENST00000555437 566 ntTSL 3 BASIC31.63■■■□□ 2.65
TOP2AP11388 MIR1199-201ENST00000621445 119 ntBASIC31.63■■■□□ 2.65
TOP2AP11388 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TOP2AP11388 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TOP2AP11388 AC148477.5-201ENST00000625164 1645 ntBASIC31.63■■■□□ 2.65
TOP2AP11388 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC31.62■■■□□ 2.65
TOP2AP11388 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC31.62■■■□□ 2.65
TOP2AP11388 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC31.62■■■□□ 2.65
TOP2AP11388 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TOP2AP11388 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TOP2AP11388 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
TOP2AP11388 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
TOP2AP11388 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
TOP2AP11388 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC31.62■■■□□ 2.65
TOP2AP11388 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC31.61■■■□□ 2.65
TOP2AP11388 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TOP2AP11388 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC31.61■■■□□ 2.65
TOP2AP11388 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TOP2AP11388 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
TOP2AP11388 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TOP2AP11388 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC31.61■■■□□ 2.65
TOP2AP11388 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC31.61■■■□□ 2.65
TOP2AP11388 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC31.61■■■□□ 2.65
TOP2AP11388 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC31.61■■■□□ 2.65
TOP2AP11388 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TOP2AP11388 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TOP2AP11388 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC31.61■■■□□ 2.65
TOP2AP11388 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
TOP2AP11388 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
TOP2AP11388 AL353593.2-201ENST00000602529 1483 ntBASIC31.6■■■□□ 2.65
TOP2AP11388 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
TOP2AP11388 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC31.6■■■□□ 2.65
TOP2AP11388 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC31.6■■■□□ 2.65
TOP2AP11388 AC023274.1-201ENST00000418278 595 ntBASIC31.6■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms