Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A2P08123 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.87■□□□□ 0.77
COL1A2P08123 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COL1A2P08123 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
COL1A2P08123 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A2P08123 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A2P08123 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.87■□□□□ 0.77
COL1A2P08123 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.87■□□□□ 0.77
COL1A2P08123 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
COL1A2P08123 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
COL1A2P08123 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.87■□□□□ 0.77
COL1A2P08123 DUTP2-201ENST00000519164 463 ntBASIC19.87■□□□□ 0.77
COL1A2P08123 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.87■□□□□ 0.77
COL1A2P08123 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.87■□□□□ 0.77
COL1A2P08123 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A2P08123 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
COL1A2P08123 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A2P08123 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.87■□□□□ 0.77
COL1A2P08123 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.87■□□□□ 0.77
COL1A2P08123 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A2P08123 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A2P08123 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A2P08123 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
COL1A2P08123 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A2P08123 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL1A2P08123 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.86■□□□□ 0.77
COL1A2P08123 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A2P08123 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A2P08123 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A2P08123 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
COL1A2P08123 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.86■□□□□ 0.77
COL1A2P08123 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.86■□□□□ 0.77
COL1A2P08123 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.86■□□□□ 0.77
COL1A2P08123 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL1A2P08123 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL1A2P08123 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.85■□□□□ 0.77
COL1A2P08123 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
COL1A2P08123 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A2P08123 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.85■□□□□ 0.77
COL1A2P08123 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A2P08123 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 AP001269.4-201ENST00000609611 512 ntBASIC19.85■□□□□ 0.77
COL1A2P08123 AP000974.1-201ENST00000623909 2387 ntBASIC19.85■□□□□ 0.77
COL1A2P08123 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A2P08123 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A2P08123 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.85■□□□□ 0.77
COL1A2P08123 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
COL1A2P08123 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
COL1A2P08123 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL1A2P08123 AC022898.2-201ENST00000616822 1312 ntBASIC19.84■□□□□ 0.77
COL1A2P08123 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 AC018445.3-201ENST00000624177 1945 ntBASIC19.84■□□□□ 0.77
COL1A2P08123 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.84■□□□□ 0.77
COL1A2P08123 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
COL1A2P08123 AC096633.1-201ENST00000422446 749 ntBASIC19.84■□□□□ 0.77
COL1A2P08123 KRT18P67-201ENST00000432816 1264 ntBASIC19.84■□□□□ 0.77
COL1A2P08123 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.84■□□□□ 0.77
COL1A2P08123 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.84■□□□□ 0.77
COL1A2P08123 FGFR3P6-201ENST00000457012 610 ntBASIC19.84■□□□□ 0.77
COL1A2P08123 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.84■□□□□ 0.77
COL1A2P08123 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.84■□□□□ 0.77
COL1A2P08123 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.84■□□□□ 0.77
COL1A2P08123 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.84■□□□□ 0.77
COL1A2P08123 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL1A2P08123 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL1A2P08123 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.84■□□□□ 0.77
COL1A2P08123 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL1A2P08123 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COL1A2P08123 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL1A2P08123 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms