Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.42■□□□□ 0.86
TPM3P06753 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 AP001094.4-201ENST00000579008 2176 ntBASIC20.42■□□□□ 0.86
TPM3P06753 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.42■□□□□ 0.86
TPM3P06753 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TPM3P06753 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 AC098934.4-201ENST00000564127 592 ntBASIC20.42■□□□□ 0.86
TPM3P06753 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.42■□□□□ 0.86
TPM3P06753 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.42■□□□□ 0.86
TPM3P06753 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.42■□□□□ 0.86
TPM3P06753 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.42■□□□□ 0.86
TPM3P06753 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.42■□□□□ 0.86
TPM3P06753 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
TPM3P06753 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TPM3P06753 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TPM3P06753 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM3P06753 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.42■□□□□ 0.86
TPM3P06753 AC022211.2-201ENST00000585075 2527 ntBASIC20.42■□□□□ 0.86
TPM3P06753 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.41■□□□□ 0.86
TPM3P06753 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.41■□□□□ 0.86
TPM3P06753 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.41■□□□□ 0.86
TPM3P06753 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 AC069152.1-201ENST00000438030 544 ntBASIC20.41■□□□□ 0.86
TPM3P06753 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.41■□□□□ 0.86
TPM3P06753 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TPM3P06753 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.41■□□□□ 0.86
TPM3P06753 AL445675.2-201ENST00000620291 557 ntBASIC20.41■□□□□ 0.86
TPM3P06753 HTR7P1-201ENST00000538670 1336 ntBASIC20.41■□□□□ 0.86
TPM3P06753 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.41■□□□□ 0.86
TPM3P06753 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.41■□□□□ 0.86
TPM3P06753 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 RCC2P3-201ENST00000418112 1537 ntBASIC20.41■□□□□ 0.86
TPM3P06753 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.41■□□□□ 0.86
TPM3P06753 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPM3P06753 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
TPM3P06753 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TPM3P06753 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TPM3P06753 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TPM3P06753 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
TPM3P06753 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.4■□□□□ 0.86
TPM3P06753 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.4■□□□□ 0.86
TPM3P06753 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.4■□□□□ 0.86
TPM3P06753 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TPM3P06753 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM3P06753 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.39■□□□□ 0.86
TPM3P06753 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.39■□□□□ 0.86
TPM3P06753 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms