Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 AC125634.1-201ENST00000438758 1403 ntBASIC17.82■□□□□ 0.44
WNT1P04628 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
WNT1P04628 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.82■□□□□ 0.44
WNT1P04628 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
WNT1P04628 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
WNT1P04628 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.82■□□□□ 0.44
WNT1P04628 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.82■□□□□ 0.44
WNT1P04628 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.82■□□□□ 0.44
WNT1P04628 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.82■□□□□ 0.44
WNT1P04628 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
WNT1P04628 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
WNT1P04628 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.82■□□□□ 0.44
WNT1P04628 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
WNT1P04628 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.82■□□□□ 0.44
WNT1P04628 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
WNT1P04628 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.81■□□□□ 0.44
WNT1P04628 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.81■□□□□ 0.44
WNT1P04628 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
WNT1P04628 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
WNT1P04628 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.81■□□□□ 0.44
WNT1P04628 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
WNT1P04628 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.81■□□□□ 0.44
WNT1P04628 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
WNT1P04628 RBM17P3-201ENST00000417687 1192 ntBASIC17.81■□□□□ 0.44
WNT1P04628 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.81■□□□□ 0.44
WNT1P04628 PMS2P1-201ENST00000431037 1228 ntBASIC17.81■□□□□ 0.44
WNT1P04628 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.81■□□□□ 0.44
WNT1P04628 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.81■□□□□ 0.44
WNT1P04628 AC011467.2-201ENST00000598425 242 ntBASIC17.81■□□□□ 0.44
WNT1P04628 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.81■□□□□ 0.44
WNT1P04628 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.81■□□□□ 0.44
WNT1P04628 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.81■□□□□ 0.44
WNT1P04628 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
WNT1P04628 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
WNT1P04628 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
WNT1P04628 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT1P04628 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
WNT1P04628 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
WNT1P04628 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
WNT1P04628 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.8■□□□□ 0.44
WNT1P04628 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT1P04628 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.8■□□□□ 0.44
WNT1P04628 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT1P04628 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT1P04628 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.8■□□□□ 0.44
WNT1P04628 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.8■□□□□ 0.44
WNT1P04628 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.8■□□□□ 0.44
WNT1P04628 FAM215A-202ENST00000632077 792 ntBASIC17.8■□□□□ 0.44
WNT1P04628 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
WNT1P04628 BX323043.1-201ENST00000641006 1765 ntBASIC17.8■□□□□ 0.44
WNT1P04628 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
WNT1P04628 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
WNT1P04628 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
WNT1P04628 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT1P04628 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT1P04628 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
WNT1P04628 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.79■□□□□ 0.44
WNT1P04628 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
WNT1P04628 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms