Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 HCG4B-203ENST00000450128 991 ntBASIC20.65■□□□□ 0.9
ALDH1A1P00352 AP000344.2-201ENST00000512987 629 ntBASIC20.65■□□□□ 0.9
ALDH1A1P00352 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 AC027612.4-201ENST00000605371 583 ntBASIC20.65■□□□□ 0.9
ALDH1A1P00352 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ALDH1A1P00352 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALDH1A1P00352 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ALDH1A1P00352 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ALDH1A1P00352 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ALDH1A1P00352 GPR89P-201ENST00000407924 1495 ntBASIC20.64■□□□□ 0.89
ALDH1A1P00352 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ALDH1A1P00352 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ALDH1A1P00352 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ALDH1A1P00352 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 AC004706.3-202ENST00000621574 984 ntBASIC20.64■□□□□ 0.89
ALDH1A1P00352 AC093028.1-201ENST00000622998 982 ntBASIC20.64■□□□□ 0.89
ALDH1A1P00352 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ALDH1A1P00352 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ALDH1A1P00352 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.64■□□□□ 0.89
ALDH1A1P00352 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ALDH1A1P00352 MYLKP1-201ENST00000509077 1580 ntBASIC20.63■□□□□ 0.89
ALDH1A1P00352 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.63■□□□□ 0.89
ALDH1A1P00352 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.63■□□□□ 0.89
ALDH1A1P00352 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALDH1A1P00352 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALDH1A1P00352 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ALDH1A1P00352 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
ALDH1A1P00352 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ALDH1A1P00352 SPDYE21P-201ENST00000413323 827 ntBASIC20.63■□□□□ 0.89
ALDH1A1P00352 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.63■□□□□ 0.89
ALDH1A1P00352 AC122714.2-201ENST00000502787 707 ntBASIC20.63■□□□□ 0.89
ALDH1A1P00352 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALDH1A1P00352 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.63■□□□□ 0.89
ALDH1A1P00352 AC018845.2-201ENST00000568326 409 ntBASIC20.63■□□□□ 0.89
ALDH1A1P00352 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
ALDH1A1P00352 AD001527.2-201ENST00000622994 785 ntBASIC20.63■□□□□ 0.89
ALDH1A1P00352 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.63■□□□□ 0.89
ALDH1A1P00352 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALDH1A1P00352 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALDH1A1P00352 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALDH1A1P00352 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 AC108073.2-201ENST00000464002 357 ntBASIC20.62■□□□□ 0.89
ALDH1A1P00352 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ALDH1A1P00352 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALDH1A1P00352 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.61■□□□□ 0.89
ALDH1A1P00352 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 KRT8P47-201ENST00000604727 1398 ntBASIC20.61■□□□□ 0.89
ALDH1A1P00352 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.61■□□□□ 0.89
ALDH1A1P00352 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALDH1A1P00352 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
ALDH1A1P00352 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms