Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 AC012313.1-201ENST00000593393 3059 ntBASIC17.11■□□□□ 0.33
SNX4O95219 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SNX4O95219 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SNX4O95219 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 SIRPAP1-201ENST00000448467 1770 ntBASIC17.1■□□□□ 0.33
SNX4O95219 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNX4O95219 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SNX4O95219 ABALON-201ENST00000629058 1903 ntBASIC17.1■□□□□ 0.33
SNX4O95219 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 AC141586.5-201ENST00000624546 2050 ntBASIC17.1■□□□□ 0.33
SNX4O95219 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SNX4O95219 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX4O95219 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SNX4O95219 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX4O95219 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.1■□□□□ 0.33
SNX4O95219 HOMER2P1-201ENST00000455653 964 ntBASIC17.1■□□□□ 0.33
SNX4O95219 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX4O95219 AC063952.2-201ENST00000498792 1227 ntBASIC17.1■□□□□ 0.33
SNX4O95219 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX4O95219 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.1■□□□□ 0.33
SNX4O95219 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.1■□□□□ 0.33
SNX4O95219 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SNX4O95219 AC011558.1-201ENST00000623459 338 ntBASIC17.1■□□□□ 0.33
SNX4O95219 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNX4O95219 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX4O95219 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX4O95219 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX4O95219 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX4O95219 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX4O95219 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX4O95219 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNX4O95219 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNX4O95219 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNX4O95219 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SNX4O95219 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.09■□□□□ 0.33
SNX4O95219 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.09■□□□□ 0.33
SNX4O95219 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.09■□□□□ 0.33
SNX4O95219 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SNX4O95219 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 KRT8P7-201ENST00000533003 1432 ntBASIC17.09■□□□□ 0.33
SNX4O95219 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 AC036111.1-201ENST00000533973 1582 ntBASIC17.09■□□□□ 0.33
SNX4O95219 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.09■□□□□ 0.33
SNX4O95219 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.09■□□□□ 0.33
SNX4O95219 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNX4O95219 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNX4O95219 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.09■□□□□ 0.33
SNX4O95219 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNX4O95219 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX4O95219 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX4O95219 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SNX4O95219 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX4O95219 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX4O95219 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SNX4O95219 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX4O95219 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.08■□□□□ 0.33
SNX4O95219 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SNX4O95219 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX4O95219 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX4O95219 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SNX4O95219 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SNX4O95219 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.08■□□□□ 0.32
SNX4O95219 MIR564-202ENST00000385049 94 ntBASIC17.08■□□□□ 0.32
SNX4O95219 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.08■□□□□ 0.32
SNX4O95219 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.08■□□□□ 0.32
SNX4O95219 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX4O95219 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX4O95219 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SNX4O95219 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms