Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RTN3O95197 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
RTN3O95197 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
RTN3O95197 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.14■□□□□ 0.65
RTN3O95197 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN3O95197 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN3O95197 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.13■□□□□ 0.65
RTN3O95197 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
RTN3O95197 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN3O95197 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTN3O95197 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.13■□□□□ 0.65
RTN3O95197 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.13■□□□□ 0.65
RTN3O95197 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN3O95197 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN3O95197 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN3O95197 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.13■□□□□ 0.65
RTN3O95197 TPSP2-201ENST00000561760 610 ntBASIC19.13■□□□□ 0.65
RTN3O95197 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RTN3O95197 MIR3652-201ENST00000579335 131 ntBASIC19.13■□□□□ 0.65
RTN3O95197 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RTN3O95197 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN3O95197 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN3O95197 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RTN3O95197 AC106820.2-201ENST00000563775 3264 ntBASIC19.12■□□□□ 0.65
RTN3O95197 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
RTN3O95197 AC099343.3-201ENST00000605834 2503 ntBASIC19.12■□□□□ 0.65
RTN3O95197 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.12■□□□□ 0.65
RTN3O95197 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RTN3O95197 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.12■□□□□ 0.65
RTN3O95197 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.12■□□□□ 0.65
RTN3O95197 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTN3O95197 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RTN3O95197 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.12■□□□□ 0.65
RTN3O95197 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 CLEC4GP1-201ENST00000596555 870 ntBASIC19.12■□□□□ 0.65
RTN3O95197 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RTN3O95197 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
RTN3O95197 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RTN3O95197 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTN3O95197 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN3O95197 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.12■□□□□ 0.65
RTN3O95197 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.11■□□□□ 0.65
RTN3O95197 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RTN3O95197 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RTN3O95197 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN3O95197 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RTN3O95197 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms