Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUPT3HO75486 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
SUPT3HO75486 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SUPT3HO75486 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SUPT3HO75486 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SUPT3HO75486 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.05■□□□□ 0.48
SUPT3HO75486 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SUPT3HO75486 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.05■□□□□ 0.48
SUPT3HO75486 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 SLC25A1P2-201ENST00000430693 912 ntBASIC18.05■□□□□ 0.48
SUPT3HO75486 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SUPT3HO75486 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SUPT3HO75486 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.05■□□□□ 0.48
SUPT3HO75486 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.05■□□□□ 0.48
SUPT3HO75486 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.05■□□□□ 0.48
SUPT3HO75486 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SUPT3HO75486 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.05■□□□□ 0.48
SUPT3HO75486 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SUPT3HO75486 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT3HO75486 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.04■□□□□ 0.48
SUPT3HO75486 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.04■□□□□ 0.48
SUPT3HO75486 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.04■□□□□ 0.48
SUPT3HO75486 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.04■□□□□ 0.48
SUPT3HO75486 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 MIR1238-201ENST00000408483 83 ntBASIC18.04■□□□□ 0.48
SUPT3HO75486 KRT18P23-201ENST00000435622 1283 ntBASIC18.04■□□□□ 0.48
SUPT3HO75486 TSPY17P-201ENST00000450329 467 ntBASIC18.04■□□□□ 0.48
SUPT3HO75486 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.04■□□□□ 0.48
SUPT3HO75486 AL023803.3-201ENST00000615559 522 ntBASIC18.04■□□□□ 0.48
SUPT3HO75486 TMEM191A-211ENST00000637163 1067 ntBASIC18.04■□□□□ 0.48
SUPT3HO75486 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SUPT3HO75486 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SUPT3HO75486 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SUPT3HO75486 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT3HO75486 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SUPT3HO75486 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 AC008764.6-201ENST00000595909 2069 ntBASIC18.03■□□□□ 0.48
SUPT3HO75486 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.03■□□□□ 0.48
SUPT3HO75486 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.03■□□□□ 0.48
SUPT3HO75486 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.03■□□□□ 0.48
SUPT3HO75486 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.03■□□□□ 0.48
SUPT3HO75486 CCR12P-201ENST00000446203 998 ntBASIC18.03■□□□□ 0.48
SUPT3HO75486 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.03■□□□□ 0.48
SUPT3HO75486 SNORA78-201ENST00000459373 127 ntBASIC18.03■□□□□ 0.48
SUPT3HO75486 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.03■□□□□ 0.48
SUPT3HO75486 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SUPT3HO75486 AL353719.1-201ENST00000566847 864 ntBASIC18.03■□□□□ 0.48
SUPT3HO75486 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.03■□□□□ 0.48
SUPT3HO75486 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SUPT3HO75486 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.03■□□□□ 0.48
SUPT3HO75486 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SUPT3HO75486 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
SUPT3HO75486 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.03■□□□□ 0.48
SUPT3HO75486 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SUPT3HO75486 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.03■□□□□ 0.48
SUPT3HO75486 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT3HO75486 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.03■□□□□ 0.48
SUPT3HO75486 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms