Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ME2-216ENST00000639850 2331 ntTSL 5 BASIC8.06□□□□□ -1.12
USH2AO75445 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
USH2AO75445 ADK-206ENST00000541550 2222 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
USH2AO75445 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
USH2AO75445 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
USH2AO75445 AL022326.1-202ENST00000641533 845 ntBASIC8.06□□□□□ -1.12
USH2AO75445 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC8.06□□□□□ -1.12
USH2AO75445 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 CD9-202ENST00000382515 1229 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 PGF-202ENST00000405431 666 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 SOD2-201ENST00000337404 991 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC8.05□□□□□ -1.12
USH2AO75445 PRYP5-201ENST00000451909 266 ntBASIC8.05□□□□□ -1.12
USH2AO75445 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC8.05□□□□□ -1.12
USH2AO75445 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 AC113404.2-201ENST00000507884 177 ntBASIC8.05□□□□□ -1.12
USH2AO75445 POLD4-207ENST00000531239 584 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 AL512356.2-201ENST00000546955 174 ntBASIC8.05□□□□□ -1.12
USH2AO75445 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC8.05□□□□□ -1.12
USH2AO75445 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 SIGLEC16-201ENST00000599858 1437 ntBASIC8.05□□□□□ -1.12
USH2AO75445 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 AC005082.1-201ENST00000413042 2259 ntBASIC8.05□□□□□ -1.12
USH2AO75445 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 KATNBL1P6-202ENST00000562413 1466 ntBASIC8.05□□□□□ -1.12
USH2AO75445 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 GOLGA6L11P-201ENST00000417252 1298 ntBASIC8.05□□□□□ -1.12
USH2AO75445 GPS2P2-201ENST00000430745 888 ntBASIC8.05□□□□□ -1.12
USH2AO75445 FAM58CP-201ENST00000435741 640 ntBASIC8.05□□□□□ -1.12
USH2AO75445 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 AC007375.3-201ENST00000600936 2314 ntBASIC8.05□□□□□ -1.12
USH2AO75445 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC8.05□□□□□ -1.12
USH2AO75445 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
USH2AO75445 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC8.05□□□□□ -1.12
USH2AO75445 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC8.05□□□□□ -1.12
USH2AO75445 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
USH2AO75445 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USH2AO75445 REXO1L3P-201ENST00000622202 1288 ntBASIC8.05□□□□□ -1.12
USH2AO75445 AC009093.7-201ENST00000623853 1223 ntBASIC8.05□□□□□ -1.12
USH2AO75445 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms