Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 COX5BP8-201ENST00000416911 349 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 DDX43P3-201ENST00000441064 443 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 KRT17P7-201ENST00000451704 1104 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 RN7SL692P-201ENST00000464677 288 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.58■□□□□ 0.4
GFRA3O60609 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GFRA3O60609 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.58■□□□□ 0.4
GFRA3O60609 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.58■□□□□ 0.4
GFRA3O60609 AC008667.4-201ENST00000607370 168 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GFRA3O60609 AC004706.3-202ENST00000621574 984 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 AC073592.4-201ENST00000623827 446 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 AC009093.7-201ENST00000623853 1223 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.58■□□□□ 0.4
GFRA3O60609 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GFRA3O60609 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GFRA3O60609 AL121761.2-201ENST00000598007 1648 ntBASIC17.58■□□□□ 0.4
GFRA3O60609 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.57■□□□□ 0.4
GFRA3O60609 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.57■□□□□ 0.4
GFRA3O60609 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GFRA3O60609 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.57■□□□□ 0.4
GFRA3O60609 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.57■□□□□ 0.4
GFRA3O60609 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.57■□□□□ 0.4
GFRA3O60609 AC010654.1-201ENST00000615722 808 ntBASIC17.57■□□□□ 0.4
GFRA3O60609 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GFRA3O60609 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.57■□□□□ 0.4
GFRA3O60609 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 AL137060.1-201ENST00000618151 2648 ntBASIC17.57■□□□□ 0.4
GFRA3O60609 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.57■□□□□ 0.4
GFRA3O60609 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GFRA3O60609 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GFRA3O60609 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.56■□□□□ 0.4
GFRA3O60609 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.56■□□□□ 0.4
GFRA3O60609 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 GPR53P-205ENST00000457298 1084 ntBASIC17.56■□□□□ 0.4
GFRA3O60609 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.56■□□□□ 0.4
GFRA3O60609 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.56■□□□□ 0.4
GFRA3O60609 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.56■□□□□ 0.4
GFRA3O60609 AC051619.7-201ENST00000568314 623 ntBASIC17.56■□□□□ 0.4
GFRA3O60609 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.56■□□□□ 0.4
GFRA3O60609 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GFRA3O60609 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GFRA3O60609 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFRA3O60609 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GFRA3O60609 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.55■□□□□ 0.4
GFRA3O60609 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 RPS15P9-201ENST00000494093 319 ntBASIC17.55■□□□□ 0.4
GFRA3O60609 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.55■□□□□ 0.4
GFRA3O60609 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.55■□□□□ 0.4
GFRA3O60609 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.55■□□□□ 0.4
GFRA3O60609 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.55■□□□□ 0.4
GFRA3O60609 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.55■□□□□ 0.4
GFRA3O60609 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.55■□□□□ 0.4
GFRA3O60609 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA3O60609 KRT8P50-201ENST00000562022 1438 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms