Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.73■□□□□ 0.27
IDH3BO43837 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IDH3BO43837 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IDH3BO43837 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
IDH3BO43837 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.73■□□□□ 0.27
IDH3BO43837 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.73■□□□□ 0.27
IDH3BO43837 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IDH3BO43837 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.72■□□□□ 0.27
IDH3BO43837 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.72■□□□□ 0.27
IDH3BO43837 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.72■□□□□ 0.27
IDH3BO43837 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IDH3BO43837 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.72■□□□□ 0.27
IDH3BO43837 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.72■□□□□ 0.27
IDH3BO43837 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.72■□□□□ 0.27
IDH3BO43837 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
IDH3BO43837 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.72■□□□□ 0.27
IDH3BO43837 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 RPPH1-201ENST00000516869 333 ntBASIC16.72■□□□□ 0.27
IDH3BO43837 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.72■□□□□ 0.27
IDH3BO43837 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.72■□□□□ 0.27
IDH3BO43837 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.72■□□□□ 0.27
IDH3BO43837 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.72■□□□□ 0.27
IDH3BO43837 MIR6786-201ENST00000616843 113 ntBASIC16.72■□□□□ 0.27
IDH3BO43837 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 FSCN1P1-201ENST00000568912 1481 ntBASIC16.72■□□□□ 0.27
IDH3BO43837 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IDH3BO43837 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.72■□□□□ 0.27
IDH3BO43837 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IDH3BO43837 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.71■□□□□ 0.27
IDH3BO43837 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.71■□□□□ 0.27
IDH3BO43837 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.71■□□□□ 0.27
IDH3BO43837 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
IDH3BO43837 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
IDH3BO43837 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.71■□□□□ 0.27
IDH3BO43837 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
IDH3BO43837 AP000593.1-201ENST00000393668 712 ntBASIC16.71■□□□□ 0.27
IDH3BO43837 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.71■□□□□ 0.27
IDH3BO43837 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.71■□□□□ 0.27
IDH3BO43837 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 AC008040.2-201ENST00000461049 708 ntBASIC16.71■□□□□ 0.27
IDH3BO43837 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
IDH3BO43837 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
IDH3BO43837 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.71■□□□□ 0.27
IDH3BO43837 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.71■□□□□ 0.27
IDH3BO43837 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 MYLKP1-201ENST00000509077 1580 ntBASIC16.71■□□□□ 0.27
IDH3BO43837 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IDH3BO43837 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
IDH3BO43837 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.71■□□□□ 0.26
IDH3BO43837 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
IDH3BO43837 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
IDH3BO43837 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms