Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
XRCC2O43543 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC2O43543 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC2O43543 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
XRCC2O43543 AC087499.1-201ENST00000418141 1075 ntBASIC15.83■□□□□ 0.12
XRCC2O43543 ECEL1P3-201ENST00000427961 737 ntBASIC15.83■□□□□ 0.12
XRCC2O43543 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC2O43543 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC2O43543 SEC1P-202ENST00000473944 940 ntBASIC15.83■□□□□ 0.12
XRCC2O43543 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.83■□□□□ 0.12
XRCC2O43543 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC2O43543 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC2O43543 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC2O43543 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
XRCC2O43543 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
XRCC2O43543 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC2O43543 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC2O43543 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.83■□□□□ 0.12
XRCC2O43543 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
XRCC2O43543 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC2O43543 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC2O43543 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.83■□□□□ 0.12
XRCC2O43543 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC2O43543 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
XRCC2O43543 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC2O43543 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
XRCC2O43543 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.83■□□□□ 0.12
XRCC2O43543 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
XRCC2O43543 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC2O43543 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
XRCC2O43543 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
XRCC2O43543 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.82■□□□□ 0.12
XRCC2O43543 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 AC008687.5-201ENST00000593746 558 ntBASIC15.82■□□□□ 0.12
XRCC2O43543 AC024243.1-201ENST00000609234 778 ntBASIC15.82■□□□□ 0.12
XRCC2O43543 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC2O43543 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC2O43543 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC2O43543 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC2O43543 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
XRCC2O43543 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC2O43543 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 FLJ13224-201ENST00000313737 1514 ntBASIC15.81■□□□□ 0.12
XRCC2O43543 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
XRCC2O43543 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.81■□□□□ 0.12
XRCC2O43543 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
XRCC2O43543 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC2O43543 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
XRCC2O43543 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
XRCC2O43543 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.81■□□□□ 0.12
XRCC2O43543 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
XRCC2O43543 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC2O43543 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC2O43543 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.81■□□□□ 0.12
XRCC2O43543 AC138028.4-201ENST00000564984 1845 ntBASIC15.81■□□□□ 0.12
XRCC2O43543 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC2O43543 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC2O43543 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 PHGDH-209ENST00000641074 1780 ntBASIC15.81■□□□□ 0.12
XRCC2O43543 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC2O43543 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 AP000997.3-201ENST00000623333 2250 ntBASIC15.8■□□□□ 0.12
XRCC2O43543 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 REXO1L9P-201ENST00000604264 2108 ntBASIC15.8■□□□□ 0.12
XRCC2O43543 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 AL096828.2-201ENST00000567259 1965 ntBASIC15.8■□□□□ 0.12
XRCC2O43543 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms