Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MSI1O43347 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.86■□□□□ 0.61
MSI1O43347 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.86■□□□□ 0.61
MSI1O43347 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.86■□□□□ 0.61
MSI1O43347 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
MSI1O43347 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.86■□□□□ 0.61
MSI1O43347 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.86■□□□□ 0.61
MSI1O43347 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.86■□□□□ 0.61
MSI1O43347 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.86■□□□□ 0.61
MSI1O43347 AL592071.1-201ENST00000611956 408 ntBASIC18.86■□□□□ 0.61
MSI1O43347 IGHV3-41-201ENST00000613121 348 ntBASIC18.86■□□□□ 0.61
MSI1O43347 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.86■□□□□ 0.61
MSI1O43347 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.86■□□□□ 0.61
MSI1O43347 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.86■□□□□ 0.61
MSI1O43347 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MSI1O43347 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSI1O43347 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.86■□□□□ 0.61
MSI1O43347 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MSI1O43347 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.85■□□□□ 0.61
MSI1O43347 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.85■□□□□ 0.61
MSI1O43347 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.85■□□□□ 0.61
MSI1O43347 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.85■□□□□ 0.61
MSI1O43347 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 AC093677.2-201ENST00000600169 1863 ntBASIC18.85■□□□□ 0.61
MSI1O43347 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 AC132938.6-201ENST00000623828 1655 ntBASIC18.85■□□□□ 0.61
MSI1O43347 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MSI1O43347 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MSI1O43347 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSI1O43347 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.84■□□□□ 0.61
MSI1O43347 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.84■□□□□ 0.61
MSI1O43347 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
MSI1O43347 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
MSI1O43347 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.84■□□□□ 0.61
MSI1O43347 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.84■□□□□ 0.61
MSI1O43347 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 KRT18P56-201ENST00000507275 550 ntBASIC18.84■□□□□ 0.61
MSI1O43347 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.84■□□□□ 0.61
MSI1O43347 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.84■□□□□ 0.61
MSI1O43347 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 TPSP2-201ENST00000561760 610 ntBASIC18.84■□□□□ 0.61
MSI1O43347 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
MSI1O43347 AC090616.6-201ENST00000582640 721 ntBASIC18.84■□□□□ 0.61
MSI1O43347 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.84■□□□□ 0.61
MSI1O43347 AC092329.2-201ENST00000598402 547 ntBASIC18.84■□□□□ 0.61
MSI1O43347 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
MSI1O43347 AC124864.1-201ENST00000623408 392 ntBASIC18.84■□□□□ 0.61
MSI1O43347 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSI1O43347 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
MSI1O43347 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms