Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDH17O14917 AC005332.1-201ENST00000577698 1310 ntBASIC17.39■□□□□ 0.37
PCDH17O14917 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH17O14917 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDH17O14917 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH17O14917 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDH17O14917 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH17O14917 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH17O14917 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDH17O14917 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDH17O14917 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDH17O14917 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH17O14917 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH17O14917 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH17O14917 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDH17O14917 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 HEIH-201ENST00000623091 1652 ntBASIC17.37■□□□□ 0.37
PCDH17O14917 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH17O14917 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
PCDH17O14917 AC010240.3-201ENST00000607688 395 ntBASIC17.37■□□□□ 0.37
PCDH17O14917 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH17O14917 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH17O14917 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH17O14917 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH17O14917 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH17O14917 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH17O14917 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH17O14917 AC067852.2-201ENST00000590513 2313 ntBASIC17.36■□□□□ 0.37
PCDH17O14917 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDH17O14917 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDH17O14917 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
PCDH17O14917 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PCDH17O14917 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 HLA-F-220ENST00000434407 884 ntBASIC17.36■□□□□ 0.37
PCDH17O14917 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH17O14917 KRT18P56-201ENST00000507275 550 ntBASIC17.36■□□□□ 0.37
PCDH17O14917 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH17O14917 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
PCDH17O14917 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDH17O14917 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
PCDH17O14917 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH17O14917 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDH17O14917 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDH17O14917 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDH17O14917 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDH17O14917 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms