Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AL928711.1-201ENST00000570165 459 ntBASIC25.16■■□□□ 1.62
CHD2O14647 MIR4751-201ENST00000578027 74 ntBASIC25.16■■□□□ 1.62
CHD2O14647 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC25.16■■□□□ 1.62
CHD2O14647 AC010654.1-201ENST00000615722 808 ntBASIC25.16■■□□□ 1.62
CHD2O14647 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 AL139400.1-201ENST00000366220 510 ntBASIC25.15■■□□□ 1.62
CHD2O14647 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 IGLL3P-201ENST00000412472 434 ntBASIC25.15■■□□□ 1.62
CHD2O14647 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD2O14647 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC25.15■■□□□ 1.62
CHD2O14647 AC239800.4-201ENST00000603712 296 ntBASIC25.15■■□□□ 1.62
CHD2O14647 AC093028.1-201ENST00000622998 982 ntBASIC25.15■■□□□ 1.62
CHD2O14647 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD2O14647 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
CHD2O14647 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC25.14■■□□□ 1.62
CHD2O14647 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC25.14■■□□□ 1.62
CHD2O14647 AC008667.4-201ENST00000607370 168 ntBASIC25.14■■□□□ 1.62
CHD2O14647 AC010507.1-201ENST00000633895 436 ntBASIC25.14■■□□□ 1.62
CHD2O14647 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHD2O14647 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHD2O14647 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC25.14■■□□□ 1.61
CHD2O14647 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC25.14■■□□□ 1.61
CHD2O14647 KLF4P1-201ENST00000412782 1185 ntBASIC25.14■■□□□ 1.61
CHD2O14647 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC25.14■■□□□ 1.61
CHD2O14647 RNF34-208ENST00000555076 593 ntTSL 3 BASIC25.14■■□□□ 1.61
CHD2O14647 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC25.14■■□□□ 1.61
CHD2O14647 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
CHD2O14647 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHD2O14647 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC25.13■■□□□ 1.61
CHD2O14647 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC25.13■■□□□ 1.61
CHD2O14647 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
CHD2O14647 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC25.13■■□□□ 1.61
CHD2O14647 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC25.13■■□□□ 1.61
CHD2O14647 MAL2-202ENST00000531508 892 ntTSL 3 BASIC25.13■■□□□ 1.61
CHD2O14647 AL589182.2-201ENST00000619332 1049 ntBASIC25.13■■□□□ 1.61
CHD2O14647 AC004706.3-202ENST00000621574 984 ntBASIC25.13■■□□□ 1.61
CHD2O14647 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CHD2O14647 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC25.13■■□□□ 1.61
CHD2O14647 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC25.13■■□□□ 1.61
CHD2O14647 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHD2O14647 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC25.12■■□□□ 1.61
CHD2O14647 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
CHD2O14647 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CHD2O14647 BCRP1-201ENST00000444246 691 ntBASIC25.12■■□□□ 1.61
CHD2O14647 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD2O14647 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC25.12■■□□□ 1.61
CHD2O14647 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC25.12■■□□□ 1.61
CHD2O14647 AC093512.1-201ENST00000617969 520 ntBASIC25.12■■□□□ 1.61
CHD2O14647 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC25.12■■□□□ 1.61
CHD2O14647 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC25.12■■□□□ 1.61
CHD2O14647 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.12■■□□□ 1.61
CHD2O14647 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
CHD2O14647 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD2O14647 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD2O14647 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD2O14647 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC25.12■■□□□ 1.61
CHD2O14647 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD2O14647 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC25.12■■□□□ 1.61
CHD2O14647 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC25.12■■□□□ 1.61
CHD2O14647 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC25.12■■□□□ 1.61
CHD2O14647 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHD2O14647 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHD2O14647 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHD2O14647 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHD2O14647 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CHD2O14647 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC25.11■■□□□ 1.61
CHD2O14647 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHD2O14647 ADH5P3-201ENST00000433842 1137 ntBASIC25.11■■□□□ 1.61
CHD2O14647 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHD2O14647 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.1■■□□□ 1.61
CHD2O14647 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC25.1■■□□□ 1.61
CHD2O14647 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD2O14647 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms