Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.87■□□□□ 0.45
CDC7O00311 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.87■□□□□ 0.45
CDC7O00311 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDC7O00311 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDC7O00311 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDC7O00311 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDC7O00311 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDC7O00311 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.86■□□□□ 0.45
CDC7O00311 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.86■□□□□ 0.45
CDC7O00311 MIR3917-201ENST00000580971 93 ntBASIC17.86■□□□□ 0.45
CDC7O00311 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 AL138966.2-201ENST00000621997 464 ntBASIC17.86■□□□□ 0.45
CDC7O00311 AC141257.4-201ENST00000634557 245 ntBASIC17.86■□□□□ 0.45
CDC7O00311 AC136944.6-201ENST00000634818 245 ntBASIC17.86■□□□□ 0.45
CDC7O00311 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDC7O00311 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.86■□□□□ 0.45
CDC7O00311 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.86■□□□□ 0.45
CDC7O00311 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.86■□□□□ 0.45
CDC7O00311 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDC7O00311 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDC7O00311 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC7O00311 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.86■□□□□ 0.45
CDC7O00311 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDC7O00311 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CDC7O00311 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CDC7O00311 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CDC7O00311 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDC7O00311 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.85■□□□□ 0.45
CDC7O00311 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.85■□□□□ 0.45
CDC7O00311 SLC25A6P5-201ENST00000435663 894 ntBASIC17.85■□□□□ 0.45
CDC7O00311 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.85■□□□□ 0.45
CDC7O00311 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CDC7O00311 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDC7O00311 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.85■□□□□ 0.45
CDC7O00311 AL157888.1-201ENST00000631930 593 ntBASIC17.85■□□□□ 0.45
CDC7O00311 AC092865.7-201ENST00000641832 219 ntBASIC17.85■□□□□ 0.45
CDC7O00311 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDC7O00311 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.84■□□□□ 0.45
CDC7O00311 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.84■□□□□ 0.45
CDC7O00311 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CDC7O00311 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.84■□□□□ 0.45
CDC7O00311 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.84■□□□□ 0.45
CDC7O00311 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.84■□□□□ 0.45
CDC7O00311 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.84■□□□□ 0.45
CDC7O00311 SLC25A3P1-201ENST00000443844 931 ntBASIC17.84■□□□□ 0.45
CDC7O00311 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDC7O00311 AC010203.1-204ENST00000548782 407 ntBASIC17.84■□□□□ 0.45
CDC7O00311 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CDC7O00311 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC7O00311 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms