Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC188H7C350 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC188H7C350 AC099343.3-201ENST00000605834 2503 ntBASIC18.93■□□□□ 0.62
CCDC188H7C350 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC188H7C350 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC188H7C350 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCDC188H7C350 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC188H7C350 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCDC188H7C350 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC188H7C350 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC188H7C350 AL138688.1-201ENST00000624851 1594 ntBASIC18.92■□□□□ 0.62
CCDC188H7C350 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC188H7C350 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 AP001094.4-201ENST00000579008 2176 ntBASIC18.92■□□□□ 0.62
CCDC188H7C350 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC188H7C350 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC188H7C350 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC188H7C350 LINC00602-201ENST00000629776 2065 ntBASIC18.91■□□□□ 0.62
CCDC188H7C350 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC188H7C350 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 AL355802.2-201ENST00000402069 882 ntBASIC18.91■□□□□ 0.62
CCDC188H7C350 MESTP1-201ENST00000404287 994 ntBASIC18.91■□□□□ 0.62
CCDC188H7C350 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 CA15P1-201ENST00000481698 905 ntBASIC18.91■□□□□ 0.62
CCDC188H7C350 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CCDC188H7C350 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC188H7C350 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC188H7C350 AF186192.3-201ENST00000583427 947 ntBASIC18.91■□□□□ 0.62
CCDC188H7C350 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC188H7C350 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 LINC01126-201ENST00000623515 1646 ntBASIC18.91■□□□□ 0.62
CCDC188H7C350 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC188H7C350 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 KRT8P7-201ENST00000533003 1432 ntBASIC18.91■□□□□ 0.62
CCDC188H7C350 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC188H7C350 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC188H7C350 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC188H7C350 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CCDC188H7C350 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC188H7C350 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC188H7C350 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC188H7C350 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC188H7C350 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 AL355312.1-201ENST00000407115 2176 ntBASIC18.9■□□□□ 0.62
CCDC188H7C350 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC188H7C350 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC188H7C350 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC188H7C350 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC188H7C350 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC188H7C350 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC188H7C350 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CCDC188H7C350 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CCDC188H7C350 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC188H7C350 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC188H7C350 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC188H7C350 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms