Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 AP000593.1-201ENST00000393668 712 ntBASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 AC026396.1-201ENST00000419388 421 ntBASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 AP000867.3-201ENST00000524675 377 ntBASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 IGHV3-41-201ENST00000613121 348 ntBASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA2E9PIF3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 WIZP1-201ENST00000531444 2299 ntBASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 AC024563.2-201ENST00000603282 481 ntBASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA2E9PIF3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 AL499627.1-201ENST00000569373 2188 ntBASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 KRT8P50-201ENST00000562022 1438 ntBASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 TPSP2-201ENST00000561760 610 ntBASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.55■□□□□ 0.24
NPIPA2E9PIF3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms