Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23AA6NH52 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.28■□□□□ 0.2
TVP23AA6NH52 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23AA6NH52 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23AA6NH52 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23AA6NH52 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.28■□□□□ 0.2
TVP23AA6NH52 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23AA6NH52 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23AA6NH52 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TVP23AA6NH52 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TVP23AA6NH52 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TVP23AA6NH52 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TVP23AA6NH52 AL390955.1-201ENST00000428694 934 ntBASIC16.27■□□□□ 0.2
TVP23AA6NH52 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 AP000525.1-201ENST00000608286 694 ntBASIC16.27■□□□□ 0.2
TVP23AA6NH52 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TVP23AA6NH52 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.27■□□□□ 0.2
TVP23AA6NH52 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TVP23AA6NH52 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TVP23AA6NH52 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.27■□□□□ 0.19
TVP23AA6NH52 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TVP23AA6NH52 AC009102.3-201ENST00000623118 1491 ntBASIC16.27■□□□□ 0.19
TVP23AA6NH52 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TVP23AA6NH52 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TVP23AA6NH52 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TVP23AA6NH52 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TVP23AA6NH52 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.19
TVP23AA6NH52 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
TVP23AA6NH52 GNAS-203ENST00000306120 1878 ntBASIC16.27■□□□□ 0.19
TVP23AA6NH52 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
TVP23AA6NH52 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 FLJ13224-201ENST00000313737 1514 ntBASIC16.26■□□□□ 0.19
TVP23AA6NH52 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 UNC93B2-201ENST00000285383 730 ntBASIC16.26■□□□□ 0.19
TVP23AA6NH52 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 AL023803.3-201ENST00000615559 522 ntBASIC16.26■□□□□ 0.19
TVP23AA6NH52 CR769767.2-201ENST00000622735 460 ntBASIC16.26■□□□□ 0.19
TVP23AA6NH52 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TVP23AA6NH52 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TVP23AA6NH52 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms