Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.57■□□□□ 0.08
TMEM235A6NFC5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 NIFKP9-201ENST00000419265 221 ntBASIC15.56■□□□□ 0.08
TMEM235A6NFC5 KRT17P3-201ENST00000420566 1262 ntBASIC15.56■□□□□ 0.08
TMEM235A6NFC5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 CKBP1-201ENST00000565489 1086 ntBASIC15.56■□□□□ 0.08
TMEM235A6NFC5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 AL109923.1-201ENST00000618799 583 ntBASIC15.56■□□□□ 0.08
TMEM235A6NFC5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 AD000864.1-201ENST00000624076 2295 ntBASIC15.56■□□□□ 0.08
TMEM235A6NFC5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM235A6NFC5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 AP003097.1-201ENST00000530657 1135 ntBASIC15.55■□□□□ 0.08
TMEM235A6NFC5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM235A6NFC5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms