Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PALM3A6NDB9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.97■□□□□ 0.95
PALM3A6NDB9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.97■□□□□ 0.95
PALM3A6NDB9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 AC233702.3-201ENST00000578656 1387 ntBASIC20.97■□□□□ 0.95
PALM3A6NDB9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 KRT18P56-201ENST00000507275 550 ntBASIC20.96■□□□□ 0.95
PALM3A6NDB9 DUTP2-201ENST00000519164 463 ntBASIC20.96■□□□□ 0.95
PALM3A6NDB9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 AP005901.3-202ENST00000581653 237 ntBASIC20.96■□□□□ 0.95
PALM3A6NDB9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.96■□□□□ 0.95
PALM3A6NDB9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.96■□□□□ 0.95
PALM3A6NDB9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PALM3A6NDB9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PALM3A6NDB9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PALM3A6NDB9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PALM3A6NDB9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 MTCL1P1-201ENST00000446207 792 ntBASIC20.95■□□□□ 0.94
PALM3A6NDB9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PALM3A6NDB9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
PALM3A6NDB9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 AC246785.2-201ENST00000432512 513 ntBASIC20.94■□□□□ 0.94
PALM3A6NDB9 LINC00265-3P-201ENST00000447588 903 ntBASIC20.94■□□□□ 0.94
PALM3A6NDB9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PALM3A6NDB9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PALM3A6NDB9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms