Protein–RNA interactions for Protein: A6NCI4

VWA3A, von Willebrand factor A domain-containing protein 3A, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3AA6NCI4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VWA3AA6NCI4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.68■□□□□ 0.9
VWA3AA6NCI4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.68■□□□□ 0.9
VWA3AA6NCI4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VWA3AA6NCI4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.68■□□□□ 0.9
VWA3AA6NCI4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.68■□□□□ 0.9
VWA3AA6NCI4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VWA3AA6NCI4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 AC138028.4-201ENST00000564984 1845 ntBASIC20.67■□□□□ 0.9
VWA3AA6NCI4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 AC073508.3-201ENST00000619697 1419 ntBASIC20.67■□□□□ 0.9
VWA3AA6NCI4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VWA3AA6NCI4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 FZD10-202ENST00000539839 3282 ntBASIC20.66■□□□□ 0.9
VWA3AA6NCI4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 HCG11-201ENST00000411553 5696 ntBASIC20.66■□□□□ 0.9
VWA3AA6NCI4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 KRT18P57-201ENST00000443599 1254 ntBASIC20.66■□□□□ 0.9
VWA3AA6NCI4 COX11P1-201ENST00000489116 835 ntBASIC20.66■□□□□ 0.9
VWA3AA6NCI4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 AL441883.1-201ENST00000566170 1045 ntBASIC20.66■□□□□ 0.9
VWA3AA6NCI4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 AC140113.3-201ENST00000605663 199 ntBASIC20.66■□□□□ 0.9
VWA3AA6NCI4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VWA3AA6NCI4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.65■□□□□ 0.9
VWA3AA6NCI4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 LINC01023-201ENST00000606054 436 ntBASIC20.65■□□□□ 0.9
VWA3AA6NCI4 AC139887.4-201ENST00000607877 719 ntBASIC20.65■□□□□ 0.9
VWA3AA6NCI4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VWA3AA6NCI4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms