Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 MIR149-201ENST00000384879 89 ntBASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV3S1A0A5B6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 SLC29A4P1-201ENST00000398760 971 ntBASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 AC026271.2-201ENST00000428091 497 ntBASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 AL162430.1-201ENST00000480705 870 ntBASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 UBALD1-205ENST00000590891 2641 ntBASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 PCDHB19P-201ENST00000570871 2371 ntBASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 AC046158.3-201ENST00000624947 2558 ntBASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TCRBV3S1A0A5B6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 AGGF1P2-201ENST00000426656 2106 ntBASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 AL023284.2-201ENST00000405850 579 ntBASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV3S1A0A5B6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV3S1A0A5B6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.02■□□□□ 0.31
TCRBV3S1A0A5B6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV3S1A0A5B6 LINC01126-201ENST00000623515 1646 ntBASIC17.02■□□□□ 0.31
TCRBV3S1A0A5B6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV3S1A0A5B6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV3S1A0A5B6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 LINC00304-203ENST00000565008 1864 ntBASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms