Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 AFG3L1P-217ENST00000557444 2447 ntBASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC022898.2-201ENST00000616822 1312 ntBASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
LOC102724428A0A0B4J2F2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 AL022326.1-202ENST00000641533 845 ntBASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.06■■□□□ 1.28
LOC102724428A0A0B4J2F2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 MTDHP5-201ENST00000598980 586 ntBASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 PMPCAP1-201ENST00000508114 1576 ntBASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 CLDN5-201ENST00000403084 2357 ntBASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC097374.2-201ENST00000618617 1306 ntBASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.05■■□□□ 1.28
LOC102724428A0A0B4J2F2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC064836.3-201ENST00000607928 673 ntBASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC073592.4-201ENST00000623827 446 ntBASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LOC102724428A0A0B4J2F2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC073621.1-201ENST00000392730 636 ntBASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.03■■□□□ 1.28
LOC102724428A0A0B4J2F2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC004817.3-201ENST00000602957 2129 ntBASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 AP006288.1-201ENST00000446065 395 ntBASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms