Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 NEK4P2-201ENST00000580004 1012 ntBASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA11Q9Y5H2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 AP000523.1-201ENST00000398242 1049 ntBASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 AC009947.2-201ENST00000444014 672 ntBASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA11Q9Y5H2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 AC139713.2-201ENST00000641328 2723 ntBASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms