Protein–RNA interactions for Protein: Q9UQB3

CTNND2, Catenin delta-2, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2Q9UQB3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 KRT8P7-201ENST00000533003 1432 ntBASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AC012317.2-201ENST00000623305 2251 ntBASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AC112497.1-201ENST00000624824 639 ntBASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AC116562.4-202ENST00000641738 218 ntBASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AC093010.1-201ENST00000473625 1624 ntBASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.22■□□□□ 0.83
CTNND2Q9UQB3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 INGX-201ENST00000359239 846 ntBASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 C2orf69P3-201ENST00000565542 1120 ntBASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTNND2Q9UQB3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CTNND2Q9UQB3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 AL024508.2-201ENST00000607749 1894 ntBASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTNND2Q9UQB3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTNND2Q9UQB3 TSPY15P-201ENST00000457163 923 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms