Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 AC116407.3-201ENST00000623905 1129 ntBASIC23.73■■□□□ 1.39
SPG7Q9UQ90 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPG7Q9UQ90 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 AC021087.4-201ENST00000563761 564 ntBASIC23.72■■□□□ 1.39
SPG7Q9UQ90 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.72■■□□□ 1.39
SPG7Q9UQ90 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 ZNF259P1-201ENST00000407656 1365 ntBASIC23.71■■□□□ 1.39
SPG7Q9UQ90 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 AC112698.1-201ENST00000510299 916 ntBASIC23.71■■□□□ 1.39
SPG7Q9UQ90 POLD2P1-201ENST00000511220 997 ntBASIC23.71■■□□□ 1.39
SPG7Q9UQ90 SART3-203ENST00000546611 1184 ntBASIC23.71■■□□□ 1.39
SPG7Q9UQ90 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.71■■□□□ 1.39
SPG7Q9UQ90 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
SPG7Q9UQ90 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SPG7Q9UQ90 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.7■■□□□ 1.38
SPG7Q9UQ90 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 PMS2P7-201ENST00000506558 1336 ntBASIC23.69■■□□□ 1.38
SPG7Q9UQ90 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 TERC-201ENST00000602385 541 ntBASIC23.69■■□□□ 1.38
SPG7Q9UQ90 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms