Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC008735.5-201ENST00000623544 497 ntBASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 AC097374.2-201ENST00000618617 1306 ntBASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 CROCCP3-202ENST00000420820 1947 ntBASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
SHANK2Q9UPX8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 RPS2P1-201ENST00000434010 821 ntBASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SHANK2Q9UPX8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 AC122714.2-201ENST00000502787 707 ntBASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 AC079776.2-201ENST00000641154 1609 ntBASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 AC098831.1-202ENST00000438821 336 ntBASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC26.93■■□□□ 1.9
SHANK2Q9UPX8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 AC126763.1-201ENST00000552015 2118 ntBASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 AC027796.2-201ENST00000575326 344 ntBASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 AC140113.2-201ENST00000604370 208 ntBASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 AC107918.4-202ENST00000641623 219 ntBASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHANK2Q9UPX8 SIGLEC16-201ENST00000599858 1437 ntBASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 AC055717.3-201ENST00000622967 595 ntBASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 AC116407.3-201ENST00000623905 1129 ntBASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHANK2Q9UPX8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
SHANK2Q9UPX8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SHANK2Q9UPX8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SHANK2Q9UPX8 LAGE3P1-201ENST00000425356 484 ntBASIC26.9■■□□□ 1.9
SHANK2Q9UPX8 PGAM5P1-201ENST00000518923 814 ntBASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms