Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 SMG8-203ENST00000578922 2178 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 PRYP5-201ENST00000451909 266 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 U62317.3-201ENST00000608319 855 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AL109936.8-201ENST00000641772 604 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 PMPCAP1-201ENST00000508114 1576 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 SPDYE21P-201ENST00000413323 827 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 MFF-223ENST00000524634 647 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AC104417.2-201ENST00000562989 1793 ntBASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
MACF1Q9UPN3 AC009237.14-201ENST00000609975 1594 ntBASIC7.4□□□□□ -1.22
MACF1Q9UPN3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 SPCS2P2-201ENST00000603270 608 ntBASIC7.4□□□□□ -1.22
MACF1Q9UPN3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 AL627223.1-201ENST00000416693 442 ntBASIC7.4□□□□□ -1.22
MACF1Q9UPN3 TMEM14DP-201ENST00000422205 345 ntBASIC7.4□□□□□ -1.22
MACF1Q9UPN3 SPDYE14P-201ENST00000442619 822 ntBASIC7.4□□□□□ -1.22
MACF1Q9UPN3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 AC034236.2-201ENST00000606662 1610 ntBASIC7.4□□□□□ -1.22
MACF1Q9UPN3 AC092919.2-201ENST00000623631 1645 ntBASIC7.4□□□□□ -1.22
MACF1Q9UPN3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 AC091046.1-201ENST00000331871 207 ntBASIC7.4□□□□□ -1.22
MACF1Q9UPN3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.22
MACF1Q9UPN3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 MPRIPP1-201ENST00000452433 1089 ntBASIC7.4□□□□□ -1.23
MACF1Q9UPN3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms