Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 FOSL1P1-201ENST00000511041 816 ntBASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 SLC25A1P1-201ENST00000528351 927 ntBASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 AL121772.3-201ENST00000610840 674 ntBASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 AC093484.2-201ENST00000580996 2166 ntBASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NOTCH3Q9UM47 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 AF238378.1-201ENST00000526806 358 ntBASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 AC005332.3-201ENST00000589904 676 ntBASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.06□□□□□ -0.16
NOTCH3Q9UM47 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 IGHGP-201ENST00000390555 1178 ntBASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 AL590627.1-203ENST00000421194 1026 ntBASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 IGHV3-47-201ENST00000425060 335 ntBASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 AP005901.3-202ENST00000581653 237 ntBASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 AL390719.2-201ENST00000606993 987 ntBASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NOTCH3Q9UM47 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms