Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 FOSL1P1-201ENST00000511041 816 ntBASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 AC012615.1-201ENST00000565797 1299 ntBASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 MIR3180-4-201ENST00000582223 153 ntBASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 AC068587.9-201ENST00000641814 219 ntBASIC20.58■□□□□ 0.89
HDAC6Q9UBN7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 KRT8P10-201ENST00000450021 1447 ntBASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC6Q9UBN7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 AC091304.2-201ENST00000564639 760 ntBASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 AC090616.6-201ENST00000582640 721 ntBASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 IGHV3-41-201ENST00000613121 348 ntBASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 AL031598.1-201ENST00000561511 1773 ntBASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC6Q9UBN7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 AL121772.3-201ENST00000610840 674 ntBASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 AC090164.3-201ENST00000610780 2143 ntBASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC6Q9UBN7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms