Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
MKS1Q9NXB0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 SLC25A1P4-201ENST00000567977 778 ntBASIC17.98■□□□□ 0.47
MKS1Q9NXB0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 WWOX-216ENST00000569818 525 ntBASIC17.98■□□□□ 0.47
MKS1Q9NXB0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MKS1Q9NXB0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.97■□□□□ 0.47
MKS1Q9NXB0 AC128676.1-201ENST00000454392 318 ntBASIC17.97■□□□□ 0.47
MKS1Q9NXB0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MKS1Q9NXB0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 FAM197Y1-201ENST00000421178 764 ntBASIC17.96■□□□□ 0.47
MKS1Q9NXB0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 RPPH1-201ENST00000516869 333 ntBASIC17.96■□□□□ 0.47
MKS1Q9NXB0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 AC132938.6-201ENST00000623828 1655 ntBASIC17.96■□□□□ 0.47
MKS1Q9NXB0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MKS1Q9NXB0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
MKS1Q9NXB0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
MKS1Q9NXB0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
MKS1Q9NXB0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms