Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 KRT18P55-202ENST00000578578 1546 ntBASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 AC139713.2-201ENST00000641328 2723 ntBASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 MFAP1P1-201ENST00000442257 1255 ntBASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 SLC25A1P4-201ENST00000567977 778 ntBASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 AC036111.1-201ENST00000533973 1582 ntBASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE2Q9NRR3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 AC099343.3-201ENST00000605834 2503 ntBASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 AL645608.8-201ENST00000606034 2086 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms