Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 AC087388.1-201ENST00000571370 1112 ntBASIC15.57■□□□□ 0.08
GCM1Q9NP62 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.57■□□□□ 0.08
GCM1Q9NP62 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 AC126763.1-201ENST00000552015 2118 ntBASIC15.56■□□□□ 0.08
GCM1Q9NP62 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 MIR149-201ENST00000384879 89 ntBASIC15.56■□□□□ 0.08
GCM1Q9NP62 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 AL671277.2-201ENST00000458060 996 ntBASIC15.56■□□□□ 0.08
GCM1Q9NP62 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 AC005082.1-201ENST00000413042 2259 ntBASIC15.56■□□□□ 0.08
GCM1Q9NP62 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GCM1Q9NP62 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GCM1Q9NP62 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 AC099343.3-201ENST00000605834 2503 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 AC009102.3-201ENST00000623118 1491 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 LINC01311-201ENST00000565162 1445 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 ARMC10P1-201ENST00000313754 855 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 AL031133.1-201ENST00000406807 723 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 PVRIG2P-201ENST00000435460 978 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 AC092597.1-201ENST00000487352 616 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 HYMAI.1-201ENST00000620949 238 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 AC079602.3-201ENST00000623931 403 ntBASIC15.55■□□□□ 0.08
GCM1Q9NP62 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GCM1Q9NP62 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
GCM1Q9NP62 WIZP1-201ENST00000531444 2299 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms