Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH9Q9HC56 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH9Q9HC56 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 AC090340.1-201ENST00000620778 4980 ntBASIC18.82■□□□□ 0.6
PCDH9Q9HC56 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH9Q9HC56 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 HCG11-201ENST00000411553 5696 ntBASIC18.81■□□□□ 0.6
PCDH9Q9HC56 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 AC113347.1-201ENST00000413321 391 ntBASIC18.81■□□□□ 0.6
PCDH9Q9HC56 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 LIN28AP1-201ENST00000429574 405 ntBASIC18.81■□□□□ 0.6
PCDH9Q9HC56 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 AC099343.3-201ENST00000605834 2503 ntBASIC18.81■□□□□ 0.6
PCDH9Q9HC56 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 KRT8P7-201ENST00000533003 1432 ntBASIC18.81■□□□□ 0.6
PCDH9Q9HC56 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH9Q9HC56 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 BCL2-203ENST00000589955 5011 ntBASIC18.8■□□□□ 0.6
PCDH9Q9HC56 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 LTB4R2-202ENST00000528054 3092 ntBASIC18.8■□□□□ 0.6
PCDH9Q9HC56 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 AL137013.1-201ENST00000432946 1228 ntBASIC18.8■□□□□ 0.6
PCDH9Q9HC56 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 AC010203.1-204ENST00000548782 407 ntBASIC18.8■□□□□ 0.6
PCDH9Q9HC56 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH9Q9HC56 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms