Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 AC091304.2-201ENST00000564639 760 ntBASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 AC093503.3-201ENST00000624917 2352 ntBASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 AL138831.2-201ENST00000606564 490 ntBASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF407Q9C0G0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 TP73-AS1-207ENST00000624167 988 ntBASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 TNXA-203ENST00000507684 2038 ntBASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF407Q9C0G0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 RNA5SP419-201ENST00000515908 135 ntBASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AC120114.3-201ENST00000611923 658 ntBASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AC009102.3-201ENST00000623118 1491 ntBASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 HLA-A-201ENST00000376802 1334 ntBASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AKR1C7P-201ENST00000305623 895 ntBASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AL121912.1-201ENST00000603683 238 ntBASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 AL773604.1-201ENST00000617417 272 ntBASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ZNF407Q9C0G0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms