Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 HEIH-201ENST00000623091 1652 ntBASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 AL390719.1-204ENST00000412397 1219 ntBASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 STK33P1-201ENST00000423835 1218 ntBASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 AC123595.1-201ENST00000440769 1046 ntBASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 YBX1P10-201ENST00000444752 975 ntBASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CYP2T3P-201ENST00000601990 817 ntBASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 AL023806.1-201ENST00000603994 1649 ntBASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms