Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL161938.1-201ENST00000569833 2180 ntBASIC12.7□□□□□ -0.38
UPK3BQ9BT76 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 AC006333.2-201ENST00000607957 2099 ntBASIC12.69□□□□□ -0.38
UPK3BQ9BT76 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.69□□□□□ -0.38
UPK3BQ9BT76 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 HLA-F-220ENST00000434407 884 ntBASIC12.68□□□□□ -0.38
UPK3BQ9BT76 PVRIG2P-201ENST00000435460 978 ntBASIC12.68□□□□□ -0.38
UPK3BQ9BT76 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 AL136038.4-201ENST00000603606 1261 ntBASIC12.68□□□□□ -0.38
UPK3BQ9BT76 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 AL157888.1-201ENST00000631930 593 ntBASIC12.68□□□□□ -0.38
UPK3BQ9BT76 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 AC106820.2-201ENST00000563775 3264 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms