Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTBDNQ9BSG5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTBDNQ9BSG5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTBDNQ9BSG5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.12■□□□□ 0.01
RTBDNQ9BSG5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 AC034236.2-201ENST00000606662 1610 ntBASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 AL138688.1-201ENST00000624851 1594 ntBASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTBDNQ9BSG5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 AC004951.3-201ENST00000418645 1148 ntBASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 AL138781.1-201ENST00000566567 1274 ntBASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTBDNQ9BSG5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 AC008403.3-201ENST00000598924 454 ntBASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms