Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.06■□□□□ 0.64
SMOQ99835 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.06■□□□□ 0.64
SMOQ99835 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.06■□□□□ 0.64
SMOQ99835 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.06■□□□□ 0.64
SMOQ99835 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 AP005901.3-202ENST00000581653 237 ntBASIC19.06■□□□□ 0.64
SMOQ99835 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SMOQ99835 CLEC4GP1-201ENST00000596555 870 ntBASIC19.06■□□□□ 0.64
SMOQ99835 AL353801.3-201ENST00000609898 542 ntBASIC19.06■□□□□ 0.64
SMOQ99835 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.06■□□□□ 0.64
SMOQ99835 AC009154.2-201ENST00000621177 724 ntBASIC19.06■□□□□ 0.64
SMOQ99835 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.06■□□□□ 0.64
SMOQ99835 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SMOQ99835 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.06■□□□□ 0.64
SMOQ99835 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SMOQ99835 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.06■□□□□ 0.64
SMOQ99835 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SMOQ99835 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SMOQ99835 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMOQ99835 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.05■□□□□ 0.64
SMOQ99835 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMOQ99835 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMOQ99835 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMOQ99835 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMOQ99835 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.05■□□□□ 0.64
SMOQ99835 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.05■□□□□ 0.64
SMOQ99835 KRT18P65-201ENST00000439811 1286 ntBASIC19.05■□□□□ 0.64
SMOQ99835 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SMOQ99835 AP000867.3-201ENST00000524675 377 ntBASIC19.05■□□□□ 0.64
SMOQ99835 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMOQ99835 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.05■□□□□ 0.64
SMOQ99835 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SMOQ99835 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.05■□□□□ 0.64
SMOQ99835 AC012313.10-201ENST00000623509 926 ntBASIC19.05■□□□□ 0.64
SMOQ99835 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.05■□□□□ 0.64
SMOQ99835 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
SMOQ99835 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.04■□□□□ 0.64
SMOQ99835 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.04■□□□□ 0.64
SMOQ99835 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMOQ99835 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.04■□□□□ 0.64
SMOQ99835 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMOQ99835 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
SMOQ99835 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMOQ99835 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
SMOQ99835 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMOQ99835 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.04■□□□□ 0.64
SMOQ99835 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.04■□□□□ 0.64
SMOQ99835 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.04■□□□□ 0.64
SMOQ99835 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SMOQ99835 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMOQ99835 DUSP5P1-201ENST00000441325 1139 ntBASIC19.03■□□□□ 0.64
SMOQ99835 MTCL1P1-201ENST00000446207 792 ntBASIC19.03■□□□□ 0.64
SMOQ99835 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.03■□□□□ 0.64
SMOQ99835 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.03■□□□□ 0.64
SMOQ99835 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.03■□□□□ 0.64
SMOQ99835 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.03■□□□□ 0.64
SMOQ99835 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.03■□□□□ 0.64
SMOQ99835 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.03■□□□□ 0.64
SMOQ99835 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.03■□□□□ 0.64
SMOQ99835 MIR3652-201ENST00000579335 131 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms